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Laboratoire d'Océanographie Microbienne
UMR 7621

Publications 2019

  1. Annunziata R, Ritter A, Fortunato AE, Cheminant-Navarro S, Agiera N, Huysman M, Petroutsos D, Finazzi G, Wingeg P, Bones A, Bouget FY, Lagomarsino MG, Bouly JP, Falciatore A. (2019). RITMO1 regulates diurnal rhythmicity in the marine diatom Phaeodactylum tricornutum. Proc Natl Acad Sci USA. pii: 201819660. doi: 10.1073/pnas.1819660116
  2. Ardyna M., Lacour L., Sergi S., d’Ovidio F., Sallée J-B. , Rembauville M., Blain S., Tagliabue A., Schlitzer R., Jeandel C., Arrigo K.R, Claustre H. (2019) Hydrothermal vents trigger massive phytoplankton blooms in the Southern Ocean. Nature Communications 10:2451 |https://doi.org/10.1038/s41467-019-09973 6|www.nature.com/naturecommunications
  3. Catao E, Pollet T, Misson B, Garnier C, Ghiglione JF, Barry-Martinet R, Maintenay M, Bressy C, Briand JF. Shear stress as a major driver of marine biofilm communities in the NW Mediterranean Sea. Frontiers in microbiology (IF 4.52) 10:1768.
  4. Debeljak P., E. Toulza, S. Beier, S. Blain, I. Obernosterer (2019) Microbial iron metabolism as revealed by gene expression profiles in contrasted Southern Ocean regimes Environ. Microbiol. 21: 2360-2374. doi:10.1111/1462-2920.14621
  5. Fichez R, Linares C, Chifflet S, Conan P, Contreras Ruiz Esparza A, Denis L, Douillet P, Grenz C, Ghiglione JF, Gutiérrez Mendieta F, Origel-Moreno M, Muñoz Caravaca A, Pujo-Pay M, Zavala-Hidalgo J. (2019) Spatiotemporal variability in Terminos Lagoon (Mexico) waters during the 2009-2010 drought reveals upcoming trophic status shift in response to climate change. Regional Environmental Change (IF 2.34) 19:1787-1799.
  6. Gonzalez M.-L., S. Blain, I. Obernosterer (2019) Seasonal freshening of NW Mediterranean surface water impacts microbial heterotrophic activity and dissolved organic matter. Estuarine, Coastal and Shelf Science 230, 10644 doi.org/10.1016/j.ecss.2019.106448
  7. Gorsky G, Bourdin G, Lombard F, Pedrotti ML, Audrain S, Bin N, Boss E, Bowler C, Cassar N, Caudan L, Chabot G, Cohen N, Cron D, De Vargas C, Dolan J, Douville E, Elineau A, Flores M, Ghiglione JF, Haëntjens N, Hertau M, Seth J, Kelly R, Koren I, Lin Y, Marie D, Moulin C, Moucherie Y, Pesant S, Picheral M, Poulain J, Pujo-Pay M, Reverdin G, Romac S,  Sullivan MB, Trainic M, Tressol M, Troublé R, Vardi A, Voolstra C, Wincker P, Agostini S, Banaigs B, Boissin E, Forcioli D, Furla P, Galand P, Gilson E, Reynaud S, Sunagawa S, Thomas OP, Thurber RLV, Zoccola D, Planes S, Allemand D,  Karsenti E. (2019) Expanding Tara Ocean protocols for underway, ecosystemic sampling strategy of surface ocean/atmosphere plankton during Tara Pacific expedition (2016-18). Frontiers in marine science (IF 3.08), DOI: 10.3389/fmars.2019.00750
  8. Jacquin J, Cheng J, Odobel C, Pandin C, Conan P, Pujo-Pay M, Barbe V, Meistertzheim AL, Ghiglione JF. Microbial ecotoxicology of marine plastic debris: a review on colonization and biodegradation by the ‘plastisphere’ Frontiers in microbiology (IF 4.52) 10:865. 
  9. Lambert S, Tragin M, Lozano JC, Ghiglione JF, Vaulot D, Bouget FY*, Galand PE* (2019). Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations. ISME Journal, (IF 9.52) 13: 388–401 (*co-corresponding authors).
  10. Liu Y., P. Debeljak, M. Rembauville, S. Blain, I. Obernosterer (2019) Diatoms shape the biogeography of heterotrophic prokaryotes in early spring in the Southern Ocean. Environ. Microbiol. 21 : 1452-1465. doi:10.1111/1462-2920.14579
  11. Meistertzheim AL, Pochon X, Wood SA, Ghiglione JF, Hédouin L (2019) Development of a quantitative PCR-high resolution melting assay for absolute measurement of coral-Symbiodiniaceae associations and its application to investigating variability at two geographic scales. Marine Biology (IF 2.61) 166:13.
  12. Nunes S., G. L. Perez, M. Latasa, M. Zamanillo, M. Delgado, E. Ortega-Retuerta, C. Marrasé, R. Simó, M. Estrada. (2019) Size fractionation, chemotaxonomic groups and bio-optical properties of phytoplankton along a transect from the Mediterranean Sea to the SW Atlantic Ocean. Scientia Marina 2019/5/30
  13. Ortega-Retuerta E, IP Mazuecos, I Reche, JM Gasol, XA Álvarez-Salgado, Marta Álvarez, María F Montero, Javier Arístegui. (2019) Transparent exopolymer particle (TEP) distribution and in situ prokaryotic generation across the deep Mediterranean Sea and nearby North East Atlantic Ocean. Progress in Oceanography 173, 180-191
  14. Ortega-Retuerta E, S Nunes, P Rodríguez-Ros, M Dall'Osto, et. al. (2019) Main drivers of transparent exopolymer particle distribution across the surface Atlantic Ocean. M Zamanillo, Biogeosciences 16 (3), 733-749
  15. Panagiotopoulos C, Pujo Pay M, Benavides M, Van Wambeke F, Sempéré R (2019). The composition and distribution of dissolved labile organic matter across the south west Pacific. Biogeosciences, 16 : 105-116 https://doi.org/10.5194/bg-16-105-2019
  16. Planes S, Allemand D, Agostini S, Banaigs B, Boissin E, Boss E, Bourdin G, Bowler C, Douville E, Forcioli D, Furla P, Galand P, Ghiglione JF, Gilson É, Lombard S, Moulin C, Pesant S, Poulain J, Reynaud S, Romac S, Sunagawa S, Thomas O, Troublé R, de Vargas C, Vega Thurber R, Voolstra CR, Wincker P, Zoccola D. The Tara Pacific expedition: a pan-ecosystemic approach of the “-omics” complexity of coral reef holobionts across the Pacific Ocean. Plos Biology (IF 8.38), https://doi.org/10.1371/journal.pbio.3000483
  17. Rain-Franco, A., Sobarzo, M., Fernandez, C. (2019) Variability of chromophoric dissolved organic matter in three freshwater influenced systems along central-southern Chile. Progress in Oceanography. 10.1016/j.pocean.2018.09.009. 
  18. Smith, D, Buddie, AG, Goss, R J M, Overmann, J, Lepleux, C, Brönstrup, M, Kloareg, B, Meiners, T, Brennecke, P, Ianora, A, Bouget, FY, Gribbon, P, Pina, M (2019). Discovery pipelines for marine resources – an ocean of opportunity for biotechnology? World Journal of Microbiology and Biotechnology World J Microbiol Biotechnol. 35(7):107. doi: 10.1007/s11274-019-2685-y.
  19. Zamanillo M., Ortega-Retuerta E., Nunes S., Estrada M., Sala M.M., Sarah-Jeanne Royer, López-Sandoval D.C., Emelianov M., Vaqué D., Marrasé C., Simó R. (2019) Distribution of transparent exopolymer particles (TEP) in distinct regions of the Southern Ocean. Science of the total environment 691: 736-748.

 

Chapitres d’ouvrages

  1. Dorador, C., Molina, V., Hengst, M., Eissler, Y., Cornejo, M., Fernández, C., Pérez, V. (2019). Microbial communities composition, activity and dynamics at Salar de Huasco, a polyextreme environment in the Chilean Altiplano. In: Extremophile microbial ecosystems in central Andes extreme environments. ME Farias (Ed). Springer, series: Cellular Origin, Life in Extreme Habitats and Astrobiology.

 

Rapports

  1. Farías, L., E. Acuña, C. Aguirre, S. Álvarez, M. A. Barbieri, V. Delgado, B. Dewitte, O. Espinoza, E. Pinilla, C. Fernández, P. Garrido, B. Jacob, N. Lagos, I. Masotti, D. Narváez, S. Navarrete, I. Pérez-Santos, L. Ramajo, L. Troncoso, C. Silva, L. Saavedra, D. Soto, C. A. Vargas, P. Winckler, C. Veas, E. Yáñez, A. Yévenes (2019). Propuestas para la actualización del Plan de Adaptación en Pesca y Acuicultura. Mesa Océanos-Comité Científico COP25; Ministerio de Ciencia, Tecnología, Conocimiento e Innovación. 88 páginas. 
  2. Farías, L., Ubilla K., C. Aguirre, L. Bedriñana, R. Cienfuegos, V. Delgado, C. Fernández, M. Fernández, A. Gaxiola, H. González, R. Hucke-Gaete, P. Marquet, Vivian Montecino, C. Morales, D. Narváez, M. Osses, B. Pe- ceño, E. Quiroga, L. Ramajo, H. Sepúlveda, D. Soto, E. Vargas, F. Viddi, J. Valencia. Nueve medidas basadas en el océano para las Contribuciones Determinadas a nivel Nacional de Chile. Comité científico COP25, mesa Océanos, 93 páginas. 
  3. Farías, L., C. Fernández, R. Garreaud, L. Guzmán, S. Hormazábal, C. Morales, D. Narváez, S. Pantoja, I. Pérez, D. Soto y P. Winckler (2019). Propuesta de un Sistema Integrado de Observación del Océano Chileno (SIOOC). Santiago: Comité Científico COP25; Ministerio de Ciencia, Tecnología, Conocimiento e Innovación. 

02/02/20

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