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Laboratoire d'Océanographie Microbienne
UMR 7621

Publications 2017

31 publications

  1. Blanchet M., Fernandez C., Joux F. (2017) Photorecativity of riverine and phytoplanktonic dissolved organic matter and its effects on the marine bacterial growth and composition in Mediterranean Sea. Progress in Oceanography http://dx.doi.org/10.1016/j.pocean.2017.03.003
  2. Blanchet M., Pringault O., Panagiotopoulos C., Lefèvre D., Charrière B., Ghiglione J-F., Fernandez C., Aparicio-Bernat Francisco L., Marrasé C., Catala P., Oriol L., Caparros J., Joux F. (2017) When riverine dissolved organic matter (DOM) meets labile DOM in coastal waters: changes in bacterial community activity and composition. Aquatic Science. 79:27-43
  3. Botebol H., Lelandais G., Six C., Lesuisse E., Meng A., Bittner L., Lecrom S., Sutak R., Lozano J-C., Schatt P., Vergé V., Blain S., Bouget F-Y. (2017) Acclimation of a low iron adapted Ostreococcus strain to iron limitation through cell biomass reduction. Nature - Scientific Report 7, Article number: 327.
  4. Brodie J., Ball S.G., Bouget F-Y., Chan C.X., De Clerck O., Cock M., Gachon C., Grossman A.R., Mock T., Raven J., Saha M., Smith A., Vardi A., Yoon H.S., Bhattacharya D. (2017) Biotic interactions as drivers of algal origin and evolution. Nature Microbiology New Phytologist DOI: 10.1111/nph.14760
  5. Conan P., Pujo-Pay M., Agab M., Calva-Benítez L., Chifflet S., Douillet P., Dussud C., Fichez R., Grenz C., Gutierrez Mendieta F., Origel-Moreno M., Rodríguez-Blanco A., Sauret C., Séverin T., Tedetti M., Torres Alvarado R., Ghiglione J-F. (2017) Biogeochemical cycling and phyto- and bacterio-plankton communities in a large and shallow tropical lagoon (Terminos Lagoon, Mexico) under 2009-2010 El Niño Modoki drought Conditions. Biogeosciences. 14, 959-975
  6. Dugenne M., Thyssen M., Lefèvre D., Conan P., Estournel C., Xavier Durrieu de Madron X., Taillandier V., Bachet C., Grosso O., Goutx M., Séverin T., Touratier F., Taupier-Letage I., Pujo-Pay M., Pommeret D., Grégori G. J. (2017) Phytoplankton production in surface open waters: Integration of in situ flow cytometry and modeling for the DeWEX cruises. Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" (in rev. 2016JC01267)
  7. Durrieu de Madron X., S. Ramondenc, L. Berline, L. Houpert, A. Bosse, S. Martini, L. Guidi, P. Conan, C. Curtil, N. Delsaut, S. Kunesch, J.-F. Ghiglione, P. Marsaleix, M. Pujo-Pay, T. Séverin, P. Testor, C. Tamburini, and the ANTARES collaboration (2017) Deep sediment resuspension and thick nepheloid layer generation by open-ocean convection. Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" DOI: 10.1002/2016JC012062
  8. Estournel C., P. Testor, P. Damien, F. D’Ortenzio, P. Marsaleix, P. Conan, F. Kessouri, X. Durrieu de Madron, L. Coppola, J.-M. Lellouche, S. Belamari, L. Mortier, C. Ulses, L. Prieur (2017) High resolution modeling of dense water formation in the north-western Mediterranean during winter 2012-2013: processes and budget. Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" DOI: 10.1002/2016JC011935
  9. Fernandez C., Rain-Franco A., Rojas C., Molina V. (2017) Ammonium release via dissolution and photodegradation of food pellets used in salmon farming. Aquaculture (Under revision)
  10. Hirth M, Liverani S, Mahlow S, Bouget FY, Pohnert G, Sasso S. (2017) Metabolic profiling identifies trehalose as an abundant and diurnally fluctuating metabolite in the microalga Ostreococcus tauri. Metabolomics. 13:68.
  11. Hunt B., Carlotti F., Donoso K., Pagano M., Pujo-Pay M., Taillandiez V., Conan P. (2017) Trophic pathways of phytoplankton size classes through the zooplankton food-web over the spring transition period in the north-west Mediterranean Sea. Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" DOI: 10.1002/2016JC012658
  12. Kessouri F., Ulses C., Estournel C., Marsaleix P., D’Ortenzio F., Taillandier V., Conan P. (2017) Influence of the mixed layer depth on the spatial variability of phytoplankton dynamics and vertical organic carbon export in the western Mediterranean Sea inferred from a 3D physical/biogeochemical coupled model. Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" (in rev. 2016JC012669)
  13. Kessouri F., Ulses C., Estournel C., Marsaleix P., Pujo-Pay M., Severin T., Caparros J., Raimbault P., De Fommervault O., D’Ortenzio F., Taillandier V., Testor P., Conan P. (2017) Nitrogen and phosphorus seasonal dynamics and annual budget in the Northwestern Mediterranean deep convection region inferred from a 3D physical/biogeochemical coupled model Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" (in rev. 2016JC012665)
  14. Leroux, R.,  G. Gregori, K. Leblanc, F. Carlotti,  M. Thyssen, M. Dugenne,  M. Pujo-Pay, P. Conan, M.-P. Jouandet, N. Bhairy, L. Berline (2017) Combining laser diffraction, flow cytometry and optical microscopy to characterize a nanophytoplankton bloom in the northwestern Mediterranean. Progress in Oceanography (in press) https://doi.org/10.1016/j.pocean.2017.10.010
  15. Mayot N., F. D’Ortenzio, V. Taillandier, L. Prieur, O. Pasqueron de Fommervault, H. Claustre, A. Bosse, P. Testor, P. Conan (2017) Impacts of the deep convection on the phytoplankton blooms in temperate seas: a multiplatform approach over a complete annual cycle (2012-2013 DEWEX experiment). Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" DOI: 10.1002/2016JC012052
  16. Mestre M., Ferrera I., Grossart H.P., Mbedi S., Ortega-Retuerta E., Borrull E., Sala M.M., Gasol J.M. (2017) Spatial variability of marine bacterial and archaeal communities along the particulate matter continuum. Molecular Ecology (in press)
  17. Molina, V., Dorador, C., Fernandez, C., Bristow, L., Eissler, Y., Hengst, M., Hernandez, K., Olsen, L., Harrod, C., Marchant, F., Anguita, C. (2017) Bacteria supports nitrification at the extreme high altitude Andean wetland ecosystem. FEMS Microbiology and Ecology (Under revision)
  18. Neira K., Rojas C., Geneviere A-M., Fernandez C. (2017) Effects of three pesticides used in salmon farming on the early development of three biological models: Mytilus chilensis, Sphaerechinus granularis and Paracentrotus lividus. Latin American Journal of Aquatic research. (Under revision)
  19. Paerl R.W., Bouget F-Y., Lozano J-C., Schatt P., Vergé V., Palenik P., Azam F. (2017) Use of plankton-derived vitamin B1 precursors, especially thiazole-related precursor, by key marine picoeukaryotic phytoplankton. The ISME Journal 11:753-765. doi: 10.1038/ismej.2016.145
  20. Rain-Franco, A., Sobarzo, M., Caparros J., Fernandez, C. (2017) Diel changes of chromophoric dissolved organic matter in river influenced coastal system off Concepcion, Chile (36°S). Journal of Marine Systems (Under revision).
  21. Rembauville M., Salter I., Dehairs F., Miquel J.-C., Blain S. (2017) Annual particulate matter and diatom export in an HNLC regime upstream of the Kerguelen Plateau in the Southern Ocean (station KERFIX) Polar Biology doi:10.1007/s00300-017-2167-3
  22. Rembauville M., N. Briggs, M. Ardyna, J. Uitz, P. Catala, C. Penkerc’ch, A. Poteau, H. Claustre, S. Blain. (2017) Plankton assemblage estimated from BGC-Argo floats in the Southern Ocean. Journal of Geophysical Research, doi:10.1002/2017JC013067
  23. Reoyo-Prats B., Aubert D., Menniti C., Wolfgang L., Sola J., Pujo-Pay M., Conan P., Verneau O., Palacios C. (2017) Multicontamination phenomena occur more often than expected in Mediterranean coastal watercourses: study case of the Têt River. Science of the Total Environment. 579:10-21
  24. Sánchez-Pérez D., Pujo-Pay M., Marrasé C., Conan P. (2017) Convection processes shape the dynamics of the dissolved organic pool at an offshore station (NW Mediterranean). Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" (in rev. 2016JC012678)
  25. Schiebel, R., Spielhagen R. F., Garnier, J., Hagemann, J., Howa, H., Jentzen, A., Martinez-García, A., Meilland, J., Michel E., Repschläger, J., Salter, I., Yamasaki, M., Haug, G. (2017) Modern planktic foraminifers in the high-latitude ocean. Marine Micropaleontology. 136:1-13.
  26. Séverin T., Kessouri F., Rembauville M., Sanchez D., Oriol L., Caparros J., Pujo-Pay M., Ghiglione J.-F., D’Ortenzio F., Taillandier V., Ulses C., Estournel C., Mayot N., Conan P. (2017) Open-ocean convection process: a driver of the winter nutrient supply and the spring phytoplankton distribution in the Northwestern Mediterranean Sea. Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" DOI: 10.1002/2016JC012664
  27. Silovic T., Conan P., Barrier N., Dugenne M., Thyssen M., Lefèvre D., Pujo-Pay M., Leroux R., Pasero E., Taillandiez V., D'ortenzio F., Fey P., Denis M., Grégori G. (2017) Microbial response to winter deep sea convection and spring bloom conditions in the Gulf of Lion (NW Mediterranean). Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" (in rev. 2016JC012663)
  28. Testor P., Bosse A., Houpert L., Margirier F., Mortier L., Lego H., Dausse D., Labaste M., Karstensen J., Hayes D., Olita A., Heslop E., D'Ortenzio F., Mayot N., Lavigne H., De Fommervault O., Coppola L., Prieur L., Taillandier V., Durrieu de Madron X., Bourrin F., Many G., Damien P., Estournel C., Marsaleix P., Taupier-Letage I., Raimbault P., Waldman R., Bouin M-N., Giordani H., Caniaux G., Somot S., Ducrocq V., Conan P. (2017). Multi-scale observations of deep convection in the northwestern Mediterranean Sea during winter 2012-2013 from a multi-platform approach. Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" (in rev. 2016JC012671)
  29. Valdes V., Fernandez C., Molina V., Escribano R. (2017) Nitrogen excretion by copepods and its effect on ammonia-oxidizing communities in a coastal upwelling zone. Limnology and Oceanography. DOI: 10.1002/lno.10629
  30. Valdés V., Fernandez C., Molina V., Escribano R., Joux F. (2017) Dissolved compounds excreted by copepods reshape the diversity and the activity of marine bacterioplankton community. Frontiers in Marine Science doi: 10.3389/fmars.2017.00343
  31. Waldman R., S. Somot, M. Herrmann, P. Testor, C. Estournel, F. Sevault, L. Prieur, L. Mortier, L. Coppola, V. Taillandier, P. Conan, D. Dausse (2017) Estimating dense water volume and its evolution for the year 2012-2013 in the North-western Mediterranean Sea: an Observing System Simulation Experiment approach. Journal of geophysical research, Special Issue "Dense water formations in the North Western Mediterranean: from the physical forcings to the biogeochemical consequences" DOI: 10.1002/2016JC011694

 

Articles soumis

Henríquez-Castillo C.A., Botebol H., Mouton A., Ramírez-Flandes S., Lozano J-C., Lelandais G., Andrade S., Trefault N., De la Iglesia R., Bouget F-Y. (2017) Genetically engineered Ostreococcus tauri biosensors for copper pollution in coastal marine environments. Frontiers in Microbiology (submitted).

Landa M., Blain S., Harmand J., Monchy S., Rapaport A., Obernosterer I. (2017). Major changes in the composition of a Southern Ocean bacterial community in response to diatom-derived dissolved organic matter. FEMS Microbiology (submitted)

Leblanc K., B. Quéguiner, F. Diaz, V. Cornet, M. Michel-Rodriguez, O. Grosso, C. Bowler, S. Malviya, C. de Vargas, X. Durrieu de Madron, M. Pujo-Pay, P. Conan. Small is beautiful, but overlooked: tiny diatoms matter. Nature communication (subm.)

28/10/17

Traductions :

    Le LOMIC en chiffres

    6 Chercheurs CNRS
    4 Enseignant-chercheurs
    8 Personnels techniques
    4 Post doctorants
    8 Etudiants en thèse

    4 Etudiants Master2