Publications 2020
Articles
- Alneberg J., Bennke C., Beier S., Bunse C., Quince C., Ininbergs K., Riemann L., Ekman M., Jürgens K., Labrenz M., Pinhassi J., Andersson A.F. (2020) Ecosystem-wide metagenomic binning enables prediction of ecological niches from genomes. Comm. Biol. 3:119. https://doi.org/10.1038/s42003-020-0856-x
- Beier S., Andersson A.F., Galand P.E., Hochart C., Logue J.B., McMahon K., Bertilsson S. (2020) The environment drives microbial trait variability in aquatic habitats. Mol. Ecol. 29:4605–4617. https://doi.org/10.1111/mec.15656
- Bejannin S, Tamborski J, Van Beek P , Souhaut M, Stieglitz T, Radakovitch O, Claude C, Conan P, Pujo-Pay M, Crispi O, Le Roy E, Estournel C. (2020). Nutrient fluxes associated with submarine groundwater discharge from karstic coastal aquifers (Côte Bleue, French Mediterranean Coastline). Front. Environ. Sci. 7:205. https://doi.org/10.3389/fenvs.2019.00205
- Blain S., Rembauville M., Crispi O., Obernosterer I. (2020) Synchronized autonomous sampling reveals coupled pulses of biomass and export of morphologically different diatoms in the Southern Ocean Limnol. Oceanogr. 66:753–764. Doi 10.1002/lno.11638
- Castillo C., Fernández C., Gutiérrez M.H., Aranda M., Urbinae M.A., Yáñez J., Álvarez A., Pantoja-Gutiérrez S. (2020). Water column circulation drives microplastic distribution in the Martínez-Baker channels; A large fjord ecosystem in Chilean Patagonia. Mar. Poll. Bull. 160:111591. https://doi.org/10.1016/j.marpolbul.2020.111591
- Christaki U., Gueneugues A., Liu Y., Blain S., Catala P., Colombet J., Debeljak P., Jardillier L., Irion S., Planchon F., Sassenhagen I., Sime‐Ngando T., Obernosterer I. (2020) Seasonal microbial food web dynamics in contrasting Southern Ocean productivity regimes. Limnol. Oceanogr. 66:108–122 https://doi.org/10.1002/lno.11591
- Faktorová D., Nisbet R.E., Fernández Robledo J.A. ... Bouget F-Y.... Lozano J-C., …Vergé V., … Lukeš J. (2020). Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods. 17:481–494. DOI: 10.1038/s41592-020-0796-x
- Fernandez C., Rain-Franco A., Rojas C., Molina V. (2020) Ammonium release via dissolution and photodegradation of food pellets used in salmon farming. Aquaculture Res. 51:779–793 DOI: 10.1111/are.14428
- Fourquez M., Bressac M., Deppeler S. L., Ellwood M., Obernosterer I., Trull T., Boyd P. (2020) Microbial competition in the subpolar Southern Ocean: an Fe-C co-limitation experiment. Front. Mar. Sci. 6:776. https://doi.org/10.3389/fmars.2019.00776
- Ghiglione J-F., Laudet V. (2020) Fish larvae: a polluted Terra Incognita is unveiled. Curr. Biol. 30:R130–R133. https://doi.org/10.1016/j.cub.2019.11.083
- Gohin F., Bryère P., Lefebvre A., Sauriau P.-G., Savoye N., Vantrepotte V., Bozec Y., Cariou T., Conan P., Coudray S., Courtay G., Françoise S., Goffart A., Hernández Fariñas T., Lemoine M., Piraud A., Raimbault P., Rétho M. (2020) Satellite and in situ monitoring of Chl-a, turbidity, and total suspended matter in coastal waters: experience of the year 2017 along the French coasts. J. Mar. Sci. Eng. 8:665. https://doi.org/10.3390/jmse8090665
- Kedzierski M., Geslain E., Pedrotti M.L., Ghiglione J-F., Bruzaud S. (2020) Pre-detection of microplastics using active thermography. Chemosphere. 262:127648. https://doi.org/10.1016/j.chemosphere.2020.127648
- Koedooder C., Guéneuguès A., Van Geersdaële R., Bouget F.-Y., Obernosterer I., Blain S. (2020) The interplay between iron limitation, light, and carbon in the proteorhodopsin-containing Photobacterium angustum S14. FEMS Microbiol. Ecol. 96:fiaa103. doi: 10.1093/femsec/fiaa103
- Lheureux A., Savoye N., Del Amo Y., Goberville E., Bozec Y., Breton E., Conan P., L’Helguen S., Mousseau L., Raimbault P., Rimelin-Maury P., Seuront L., Vuillemin R., Caparros J., Cariou T., Cordier M-A., Corre A-M., Costes L., Crispi O., Crouvoisier M., de Lary de Latour H., Derriennic H., Devesa J., Durozier M., Ferreira S., Garcia N., Grossteffan E., Gueux A., Lafont M., Lagadec V., Lecuyer E., Leroux C., Macé E., Maria E., Mornet L., Nowaczyk A., Parra M., Petit F., David V. 2020. Bi-decadal variability in physico-biogeochemical characteristics of the temperate coastal ecosystems: from large-scale to local drivers. Mar. Ecol. Porg. Ser. 660:19–35. DOI: https://doi.org/10.3354/meps13577
- Liénart C., Savoye N., Conan P., David V., Barbier P., Bichon S., Charlier K., Costes L., Derriennic H., Ferreira S., Gueux A., Hubas C., Maria E., Meziane T. (2020) Relationship between bacterial compartment and particulate organic matter (POM) in coastal systems: An assessment using fatty acids and stable isotope. Estuar. Coast. Shelf Sci. 239:106720. doi.org/10.1016/j.ecss.2020.106720.
- Liu Y, Rembauville M., Crispi O., Blain S., Obernosterer I. (2020) Seasonal dynamics of prokaryotes and their associations with diatoms in the Southern Ocean as revealed by an autonomous sampler. Environ. Microbiol. 22:3968–3984. doi.org/10.1111/1462-2920.15184
- Massicotte, P., Amiraux, R., Amyot, M.-P., Archambault, P., Ardyna, M., Arnaud, L., Artigue, L., Aubry, C., Ayotte, P., Bécu, G., Bélanger, S., Benner, R., Bittig, H. C., Bricaud, A., Brossier, É., Bruyant, F., Chauvaud, L., Christiansen-Stowe, D., Claustre, H., Cornet-Barthaux, V., Coupel, P., Cox, C., Delaforge, A., Dezutter, T., Dimier, C., Dominé, F., Dufour, F., Dufresne, C., Dumont, D., Ehn, J., Else, B., Ferland, J., Forget, M.-H., Fortier, L., Galí, M., Galindo, V., Gallinari, M., Garcia, N., Gérikas-Ribeiro, C., Gourdal, M., Gourvil, P., Goyens, C., Grondin, P.-L., Guillot, P., Guilmette, C., Houssais, M.-N., Joux, F., Lacour, L., Lacour, T., Lafond, A., Lagunas, J., Lalande, C., Laliberté, J., Lambert-Girard, S., Larivière, J., Lavaud, J., Le Gall, F., LeBaron, A., Leblanc, K., Legras, J., Lemire, M., Levasseur, M., Leymarie, E., Leynaert, A., Lopes dos Santos, A., Lourenço, A., Mah, D., Marec, C., Marie, D., Martin, N., Marty, C., Marty, S., Massé, G., Matsuoka, A., Matthes, L., Moriceau, B., Muller, P.-E., Mundy, C. J., Neukermans, G., Oziel, L., Panagiotopoulos, C., Pangazi, J.-J., Picard, G., Picheral, M., Pinczon du Sel, F., Pogorzelec, N., Probert, I., Queguiner, B., Raimbault, P., Ras, J., Rehm, E., Reimer, E., Rontani, J.-F., Rysgaard, S., Saint-Béat, B., Sampei, M., Sansoulet, J., Schmidt, S., Sempéré, R., Sévigny, C., Shen, Y., Tragin, M., Tremblay, J.-É., Vaulot, D., Verin, G., Vivier, F., Vladoiu, A., Whitehead, J., and Babin, M. (2020) Green Edge ice camp campaigns: understanding the processes controlling the under-ice Arctic phytoplankton spring bloom. Earth Syst. Sci. Data. 12:151–176. https://doi.org/10.5194/essd-12-151-2020
- Molina, V., Fernandez C. Bacterioplankton response to nitrogen and dissolved organic matter produced from salmon mucus (Puyuhuapi Fjord, Northern Patagonia, Chile). MicrobiologyOpen. 12:e1132. DOI: 10.1002/mbo3.1132
- Pellichero V., Boutin J., Claustre H., Merlivat L., Sallée J.B., Blain S. (2020) Abrupt onset of Kerguelen bloom detected by multisensors mounted on mooring and BGC floats. Geophys. Res. Lett. 47:e2019GL085992. https://doi.org/10.1029/2019GL085992
- Pesce S., Ghiglione J-F., Topp E., Martin-Laurent F. (2020). Editorial: Microbial Ecotoxicology. Front. Microbiol. 11:1342. https://doi.org/10.3389/fmicb.2020.01342
- Ratnarajah L., Blain S., Boyd P.W., Fourquez M., Obernosterer I., Tagliabue A. (2020) Resource colimitation drives competition between phytoplankton and bacteria in the Southern Ocean. Geophy. Res. Lett. 48:e2020GL088369. DOI: 10.1029/2020GL088369
- Roumezi B., Avilan L., Risoul V., Brugna M., Rabouille S., Latifi A. (2020) Overproduction of the Flv3B flavodiiron, enhances the photobiological hydrogen production by the nitrogen-fixing cyanobacterium Nostoc PCC 7120. Microbial Cell Factories. 19:65. https://doi.org/10.1186/s12934-020-01320-5
- Saint-Béat, B., Fath, B.D., Aubry, C., Colombet, J., Dinasquet, J., Fortier, L., Galindo, V., Grondin, P.-L., Joux, F., Lalande, C., LeBlanc, M., Raimbault, P., Sime-Ngando, T., Tremblay, J.-E., Vaulot, D., Maps, F. and Babin, M. (2020) Contrasting pelagic ecosystem functioning in eastern and western Baffin Bay revealed by trophic network modeling. Elem. Sci. Anth. 8:1. DOI: http://doi.org/10.1525/elementa.397
- Sánchez-Pérez E.D., Pujo-Pay M., Ortega-Retuerta E., Conan P., Marrasé C. (2020). Mismatched dynamics of dissolved organic carbon and chromophoric dissolved organic matter in the coastal NW Mediterranean Sea. Sci. Tot. Environ. 746:141190. https://doi.org/10.1016/j.scitotenv.2020.141190
- Sergi S. Baudena A., Cotté C., Ardyna M., Blain S. d’Ovidio F. (2020) Interaction of the Antarctic circumpolar current with seamounts fuels moderate blooms but vast foraging grounds for multiple marine predators frontiers. Front. Mar. Sci. 7:416. doi: 10.3389/fmars.2020.00416.
- Sotomayor-Garcia A., Montserrat Sala M., Ferrera I., Estrada M., Vázquez-Domínguez E., Emelianov M., Cortés P., Marrasé C., Ortega-Retuerta E., Nunes S., M. Castillo Y., Serrano Cuerva M., Sebastián M., Dall’Osto M., Simó R., Vaqué D. (2020) Assessing viral abundance and community composition in four contrasting regions of the Southern Ocean. Life. 10:107. DOI: 10.3390/life10070107
- Tamborski J., Van Beek P., Conan P., Pujo-Pay M., Odobel C., Ghiglione J-F., Seidel J-L., Arfi B., Diego-Feliue M., Garcia-Orellanaef J., Szafrana A., Souhauta M. (2020) Submarine karstic springs as a source of nutrients and bioactive trace metals for the oligotrophic Northwest Mediterranean Sea. Sci. Tot. Environ. 732:139106. https://doi.org/10.1016/j.scitotenv.2020.139106
- Tisserand L., Dadaglio L., Intertaglia L., Catala P., Panagiotopoulos C., Obernosterer I., Joux F. (2020) Use of organic exudates from two polar diatoms by bacterial isolates from the Arctic Ocean. Phil. Trans. R. Soc. A. 378:20190356. DOI: 10.1098/rsta.2019.0356
Chapitres d’ouvrages
Lami R., Grimaud R., Sanchez-Brosseau S., Six C., Thomas F., West N.J., Joux F., Urios L. (2020) Marine bacterial models for experimental biology. In: Established and emerging marine organisms in experimental biology. Boutet B. & Schierwater B. (eds). CRC Press (in press).
Lartaud F., Meistertzheim A.L., Reichert J., Ziegler M., Peru E., Ghiglione J-F. (2020) Plastics, an additional threat for coral ecosystems. Perspectives on the Marine Animal Forests, Springer-Verlag. https://www.springer.com/gp/book/9783030570538
Dorador, C., Molina, V., Hengst, M., Eissler, Y., Cornejo, M., Fernández, C., Pérez, V. Microbial Communities Composition, Activity, and Dynamics at Salar de Huasco: A Polyextreme Environment in the Chilean Altiplano. In: Microbial Ecosystems in Central Andes Extreme Environments. ME Farias (Ed). Springer, series: Cellular Origin, Life in Extreme Habitats and Astrobiology. doi: 10.1007/978-3-030-36192-1
Galgani F., Bruzaud S., Duflos G., Fabre P., Gastaldi E., Ghiglione J-F., Grimaud R., George M., Huvet A., Lagarde F., Paul-Pont I., ter Halle A. (2020) Pollution des océans par les plastiques et les microplastiques. Techniques de l’ingénieur.